6A.1-6A.7 - Organic Formulae, Naming And Isomerism

6A.1-6A.7 - Organic Formulae, Naming And Isomerism

Organic formulae communicate different information: atom ratios, connectivity or arrangement in space. This lesson shows how to translate between representations, name compounds, recognise reaction types and distinguish structural isomers from E/Z stereoisomers.

Why One Molecule Can Have Several Formulae

A label such as CX4HX10\ce{C4H10} gives the atoms present, but it does not tell you how the atoms are connected. That is a serious limitation in organic chemistry: the same molecular formula can describe more than one molecule. The first job is to choose the representation that carries the information the question needs.

Hydrocarbon

A compound containing carbon and hydrogen only.

CHX4\ce{CH4}, CX2HX6\ce{C2H6}, CX6HX14\ce{C6H14} and CX2HX4\ce{C2H4} are hydrocarbons; CHX3CHX2OH\ce{CH3CH2OH} is not, because oxygen is present.

[DIAGRAM: asset_name: Organic Representation Motifs; asset_slug: edexcel_a_level_chemistry_l029_organic_representation_motifs; recommended_method: deterministic_chart; description: Butane shown as molecular, structural, displayed and skeletal formulae; each skeletal end or vertex represents carbon.]
Diagram

Use these formula types with different expectations:

RepresentationWhat it tells youExample using ethane or propaneWhat it hides
Empirical formulaSimplest whole-number ratio of atomsCX2HX6\ce{C2H6} has empirical formula CHX3\ce{CH3}Actual molecule size and connectivity
Molecular formulaActual number of each atom in one moleculeCX2HX6\ce{C2H6}Which atom is bonded to which
General formulaPattern for a homologous seriesAlkanes use CXnHX2n+2\ce{C_nH_{2n+2}}The identity of a particular molecule
Structural formulaConnectivity in a compact formCHX3CHX2CHX3\ce{CH3CH2CH3}Some individual bonds to hydrogen
Displayed formulaEvery atom and every bondAll three carbon atoms and all eight hydrogens in propane shown with bondsShape is still drawn on a page, not a full 3D model
Skeletal formulaCarbon skeleton with carbon atoms and most carbon-bound hydrogens omittedPropane as a two-line carbon chainThe reader must supply carbon atoms at line ends/vertices and enough hydrogens for carbon valency four

In skeletal formulae, each line end or vertex is a carbon atom unless another atom is written. Hydrogens attached to carbon are usually not shown; heteroatoms such as O\ce{O}, N\ce{N}, Cl\ce{Cl} and hydrogens attached to them must be shown. Double and triple bonds are still drawn because they change both bonding and formula.

Worked Example

Represent butane, molecular formula CX4HX10\ce{C4H10}, in several ways.

RouteResultReasoning
Empirical formulaCX2HX5\ce{C2H5}Divide CX4HX10\ce{C4H10} by 2 to get the simplest ratio.
Molecular formulaCX4HX10\ce{C4H10}This gives the actual atom count in one molecule.
Structural formulaCHX3CHX2CHX2CHX3\ce{CH3CH2CH2CH3}This shows four carbons connected in a straight chain.
Displayed formulaFour carbon atoms joined in a chain, with ten C−H\ce{C-H} bonds shownCarbon must make four bonds in a neutral organic molecule.
Skeletal formulaA three-segment zig-zag lineFour carbon atoms are implied by the two ends and two internal vertices.

The chemical interpretation is that these are not five different substances. They are five levels of detail for the same substance, and a question may ask you to translate from one level to another.

A molecular formula is not a structural formula

CX4HX10\ce{C4H10} only gives the atom count. A structural formula must show how the atoms are connected, for example CHX3CHX2CHX2CHX3\ce{CH3CH2CH2CH3}.

Homologous Series, Functional Groups And Names

Organic chemistry becomes manageable because molecules fall into families.

Homologous series

A family of organic compounds with the same functional group and general formula, similar chemical reactions, and successive members differing by CHX2\ce{CH2}.

Successive members differ by CHX2\ce{CH2}, so their physical properties such as boiling temperature change gradually as the carbon chain gets longer.

Functional group

The atom, group of atoms or bond pattern in a molecule that is responsible for its characteristic reactions.

For example, a C=C\ce{C=C} bond gives alkene behaviour, -OH gives alcohol behaviour, and a halogen atom in a haloalkane changes the molecule's polarity and reactions. You do not need every later reaction yet; you do need to recognise that the functional group is the reactive handle.

For IUPAC-style naming in this specification, the carbon-chain prefixes up to CX10\ce{C10} are essential:

Carbon atomsPrefixExample parent name
1meth-methane
2eth-ethane
3prop-propane
4but-butane
5pent-pentane
6hex-hexane
7hept-heptane
8oct-octane
9non-nonane
10dec-decane

Use a naming route rather than guessing:

  1. Find the longest carbon chain that contains the main functional group or multiple bond.
  2. Choose the parent prefix from the number of carbons in that chain.
  3. Choose the ending from the family, such as -ane for an alkane or -ene for an alkene.
  4. Number the chain to give the important feature the lowest possible number.
  5. Add side-chain names and position numbers, such as 2-methyl-. Repeated identical branches use di-, tri- and so on, with every locant shown: CHX3C(CHX3)X2CHX3\ce{CH3C(CH3)2CH3} is 2,2-dimethylpropane, because both methyl branches are on carbon 2 of a three-carbon parent. When several branches are present, use the lowest set of locants at the first point of difference; different branch names are listed alphabetically, ignoring di-/tri- for ordering.

Worked Example

Name CHX3CH(CHX3)CHX2CHX3\ce{CH3CH(CH3)CH2CH3}.

The longest continuous chain has four carbon atoms, so the parent is butane. There is a one-carbon branch, methyl, on carbon 2 when the chain is numbered from the nearer end. The name is 2-methylbutane.

The tempting wrong name is 3-methylbutane. That uses the same chain but numbers from the far end; IUPAC numbering gives the lowest possible locant to the branch.

Guided Practice

Name each structure.

StructureDecisionName
CHX3CHX2CHX2CHX2CHX3\ce{CH3CH2CH2CH2CH3}Five-carbon saturated chainpentane
CHX3CHX2CH=CHX2\ce{CH3CH2CH=CH2}Four-carbon chain; number from the double-bond endbut-1-ene
CHX3CH(CHX3)CHX3\ce{CH3CH(CH3)CH3}Three-carbon parent with a methyl branch on carbon 22-methylpropane

Common-Error Contrast

But-1-ene and but-2-ene have the same molecular formula, but the number is not decorative. It tells you where the double bond is. In organic naming, a missing or wrong locant can describe a different molecule.

Classifying Organic Reaction Types

Before you learn detailed mechanisms, you need to classify what sort of change has happened. The classification comes from the structural change, not from the size of the equation or the memorised topic heading.

Reaction classRecognition clueSimple organic example
AdditionTwo reactants form one main product; atoms add across a multiple bondCHX2=CHX2+BrX2→BrCHX2CHX2Br\ce{CH2=CH2 + Br2 -> BrCH2CH2Br}
EliminationA small molecule is removed and a multiple bond often formsCHX3CHX2OH→CHX2=CHX2+HX2O\ce{CH3CH2OH -> CH2=CH2 + H2O}
SubstitutionOne atom or group is replaced by anotherCHX4+ClX2→CHX3Cl+HCl\ce{CH4 + Cl2 -> CH3Cl + HCl}
OxidationOxidation state increases; in organic shorthand often gain of O or loss of HCHX3CHX2OH+[O]→CHX3CHO+HX2O\ce{CH3CH2OH + {[O]} -> CH3CHO + H2O}
ReductionOxidation state decreases; in organic shorthand often gain of H or loss of OCHX3CHO+2 [H]→CHX3CHX2OH\ce{CH3CHO + 2{[H]} -> CH3CH2OH}
HydrolysisA bond is broken by reaction with water, aqueous acid or aqueous alkaliRCOORX′+HX2O→RCOOH+RX′OH\ce{RCOOR' + H2O -> RCOOH + R'OH} as an ester pattern
PolymerisationMany monomers join to form a long-chain moleculen CHX2=CHX2→−(CHX2−CHX2)XnX−n\,\ce{CH2=CH2 -> -(CH2-CH2)_{n}-}

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